Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
SEC61A1P61619 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.52□□□□□ -0.41
SEC61A1P61619 HOMER2P2-201ENST00000451621 847 ntBASIC12.52□□□□□ -0.41
SEC61A1P61619 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.52□□□□□ -0.41
SEC61A1P61619 COX5BP1-201ENST00000507622 393 ntBASIC12.52□□□□□ -0.41
SEC61A1P61619 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC61A1P61619 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC61A1P61619 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC61A1P61619 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
SEC61A1P61619 AC073413.1-201ENST00000603927 732 ntBASIC12.52□□□□□ -0.41
SEC61A1P61619 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.52□□□□□ -0.41
SEC61A1P61619 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.52□□□□□ -0.41
SEC61A1P61619 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
SEC61A1P61619 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 GOLGA2P4-201ENST00000441462 777 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 Z93015.1-201ENST00000451718 390 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.51□□□□□ -0.41
SEC61A1P61619 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SEC61A1P61619 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SEC61A1P61619 AC106820.3-201ENST00000561653 397 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 C2orf69P2-201ENST00000562032 1123 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 MIR4525-201ENST00000580000 75 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 AC091271.1-201ENST00000611877 1162 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 AC138466.3-201ENST00000619983 221 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 GPR182-203ENST00000622922 591 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.51□□□□□ -0.41
SEC61A1P61619 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 KRT8P4-201ENST00000509735 1454 ntBASIC12.51□□□□□ -0.41
SEC61A1P61619 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.51□□□□□ -0.41
SEC61A1P61619 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
SEC61A1P61619 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SEC61A1P61619 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.51□□□□□ -0.41
SEC61A1P61619 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms