Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.63□□□□□ -0.55
CEACAM3P40198 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 POU5F1P2-201ENST00000521750 823 ntBASIC11.63□□□□□ -0.55
CEACAM3P40198 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.63□□□□□ -0.55
CEACAM3P40198 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 MAPK10-262ENST00000641051 5738 ntBASIC11.63□□□□□ -0.55
CEACAM3P40198 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.63□□□□□ -0.55
CEACAM3P40198 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
CEACAM3P40198 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CEACAM3P40198 AP002353.1-201ENST00000528257 1599 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC239868.1-201ENST00000369385 493 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 AC103592.1-201ENST00000394513 664 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 AC016700.1-201ENST00000429424 312 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC092580.1-201ENST00000433998 658 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC099548.2-209ENST00000480264 625 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.62□□□□□ -0.55
CEACAM3P40198 AL359881.3-201ENST00000602640 1721 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC11.62□□□□□ -0.55
CEACAM3P40198 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CEACAM3P40198 AC007952.5-201ENST00000572818 1486 ntBASIC11.62□□□□□ -0.55
CEACAM3P40198 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms