Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 RN7SL832P-201ENST00000607781 1756 ntBASIC10.92□□□□□ -0.66
RAB4AP20338 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RAB4AP20338 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
RAB4AP20338 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC10.92□□□□□ -0.66
RAB4AP20338 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
RAB4AP20338 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 PAFAH2-202ENST00000374284 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 NCLP1-201ENST00000445357 1963 ntBASIC10.92□□□□□ -0.66
RAB4AP20338 PRPF40A-202ENST00000410080 8048 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RAB4AP20338 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 AC072061.1-201ENST00000569710 2234 ntBASIC10.92□□□□□ -0.66
RAB4AP20338 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RAB4AP20338 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
RAB4AP20338 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RAB4AP20338 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC010970.1-201ENST00000445125 1848 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 DDC-213ENST00000617822 1809 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC011840.2-201ENST00000563063 1520 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 ARMCX2-203ENST00000356824 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC004066.1-201ENST00000502488 802 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 RNA5SP419-201ENST00000515908 135 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.91□□□□□ -0.66
RAB4AP20338 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC145285.3-201ENST00000564603 959 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 KRT18P8-201ENST00000581937 1246 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.91□□□□□ -0.66
RAB4AP20338 AL691432.3-201ENST00000621860 400 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 MYT1L-204ENST00000428368 4850 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 DENND1C-201ENST00000381480 2816 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 LIMCH1-208ENST00000508501 5054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 LIMCH1-217ENST00000512946 5057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC135782.3-201ENST00000562782 2105 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC10.91□□□□□ -0.66
RAB4AP20338 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC104109.2-201ENST00000602919 1418 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 ITIH1-201ENST00000273283 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
RAB4AP20338 AC005696.4-201ENST00000614400 3147 ntBASIC10.91□□□□□ -0.66
RAB4AP20338 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.91□□□□□ -0.66
RAB4AP20338 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.9□□□□□ -0.66
RAB4AP20338 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RAB4AP20338 TACC1-201ENST00000276520 6513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms