Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGA1P17096 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA1P17096 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGA1P17096 GOLGA2P7-209ENST00000560408 745 ntBASIC14.47□□□□□ -0.09
HMGA1P17096 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 AC011247.3-201ENST00000603297 438 ntBASIC14.47□□□□□ -0.09
HMGA1P17096 AC006483.2-201ENST00000609813 515 ntBASIC14.47□□□□□ -0.09
HMGA1P17096 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC14.47□□□□□ -0.09
HMGA1P17096 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 CR392039.2-201ENST00000623182 509 ntBASIC14.47□□□□□ -0.09
HMGA1P17096 AC138466.4-201ENST00000623965 852 ntBASIC14.47□□□□□ -0.09
HMGA1P17096 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HMGA1P17096 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HMGA1P17096 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.47□□□□□ -0.09
HMGA1P17096 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HMGA1P17096 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGA1P17096 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 HNRNPA1P56-201ENST00000505767 954 ntBASIC14.46□□□□□ -0.09
HMGA1P17096 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGA1P17096 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC055811.3-201ENST00000584952 686 ntBASIC14.46□□□□□ -0.09
HMGA1P17096 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC244250.3-201ENST00000620749 366 ntBASIC14.46□□□□□ -0.09
HMGA1P17096 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC092115.1-201ENST00000566277 1402 ntBASIC14.46□□□□□ -0.09
HMGA1P17096 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HMGA1P17096 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HMGA1P17096 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.46□□□□□ -0.09
HMGA1P17096 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
HMGA1P17096 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A21P-201ENST00000510875 1396 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A15P-201ENST00000514465 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A6P-201ENST00000515148 1394 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A16P-201ENST00000526662 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A9P-201ENST00000527940 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A5P-201ENST00000528738 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A14P-201ENST00000530386 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 FAM90A13P-201ENST00000534703 1395 ntBASIC14.46□□□□□ -0.1
HMGA1P17096 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.46□□□□□ -0.1
HMGA1P17096 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HMGA1P17096 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGA1P17096 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HMGA1P17096 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HMGA1P17096 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA1P17096 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HMGA1P17096 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.45□□□□□ -0.1
HMGA1P17096 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HMGA1P17096 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.45□□□□□ -0.1
HMGA1P17096 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA1P17096 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.45□□□□□ -0.1
HMGA1P17096 BPIFB5P-201ENST00000457066 1099 ntBASIC14.45□□□□□ -0.1
HMGA1P17096 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.45□□□□□ -0.1
HMGA1P17096 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms