Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
COL5A2P05997 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL5A2P05997 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
COL5A2P05997 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL5A2P05997 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 RNA5SP84-201ENST00000364740 107 ntBASIC17.98■□□□□ 0.47
COL5A2P05997 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC17.98■□□□□ 0.47
COL5A2P05997 PMF1-201ENST00000368273 884 ntTSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 AC105443.1-201ENST00000433754 712 ntBASIC17.98■□□□□ 0.47
COL5A2P05997 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC17.98■□□□□ 0.47
COL5A2P05997 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.98■□□□□ 0.47
COL5A2P05997 MST1L-204ENST00000545160 559 ntTSL 4 BASIC17.98■□□□□ 0.47
COL5A2P05997 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC17.98■□□□□ 0.47
COL5A2P05997 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC17.98■□□□□ 0.47
COL5A2P05997 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC17.98■□□□□ 0.47
COL5A2P05997 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 AL356740.1-201ENST00000602192 1297 ntBASIC17.98■□□□□ 0.47
COL5A2P05997 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL5A2P05997 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
COL5A2P05997 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.98■□□□□ 0.47
COL5A2P05997 CICP16-201ENST00000502609 2813 ntBASIC17.98■□□□□ 0.47
COL5A2P05997 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL5A2P05997 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 AC097359.2-201ENST00000604992 2389 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 AC002350.2-201ENST00000623894 1828 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 AL031587.5-201ENST00000624344 1849 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC17.97■□□□□ 0.47
COL5A2P05997 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 ACTG1P23-201ENST00000437653 1074 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 HNRNPA1P3-201ENST00000440968 551 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 YBX1P3-201ENST00000468366 909 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
COL5A2P05997 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC17.97■□□□□ 0.47
COL5A2P05997 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 AC112220.4-201ENST00000604982 1263 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 DLX4-206ENST00000611342 1662 ntBASIC17.97■□□□□ 0.47
COL5A2P05997 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
COL5A2P05997 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL5A2P05997 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.97■□□□□ 0.47
COL5A2P05997 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL5A2P05997 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL5A2P05997 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC17.96■□□□□ 0.47
COL5A2P05997 DUX4L31-201ENST00000446466 1136 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 RN7SL789P-201ENST00000478944 293 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 AK2-208ENST00000487289 920 ntTSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 ALDOAP1-201ENST00000491506 1078 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC17.96■□□□□ 0.47
COL5A2P05997 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC17.96■□□□□ 0.47
COL5A2P05997 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC17.96■□□□□ 0.47
COL5A2P05997 RN7SL300P-201ENST00000582522 318 ntBASIC17.96■□□□□ 0.47
COL5A2P05997 BOLA3P2-201ENST00000586496 323 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms