Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC012531.1-201ENST00000562848 2680 ntBASIC11.92□□□□□ -0.5
CD74P04233 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 AL138709.1-201ENST00000614840 1693 ntBASIC11.92□□□□□ -0.5
CD74P04233 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 BASP1P1-201ENST00000430708 665 ntBASIC11.92□□□□□ -0.5
CD74P04233 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC11.92□□□□□ -0.5
CD74P04233 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC11.92□□□□□ -0.5
CD74P04233 AC009486.1-201ENST00000569860 813 ntBASIC11.92□□□□□ -0.5
CD74P04233 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 TECR-220ENST00000600083 1204 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CD74P04233 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CD74P04233 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.92□□□□□ -0.5
CD74P04233 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.92□□□□□ -0.5
CD74P04233 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.92□□□□□ -0.5
CD74P04233 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC11.92□□□□□ -0.5
CD74P04233 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CD74P04233 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CD74P04233 MANEA-AS1-201ENST00000564541 2268 ntBASIC11.91□□□□□ -0.5
CD74P04233 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 NSL1-201ENST00000366976 722 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.91□□□□□ -0.5
CD74P04233 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.91□□□□□ -0.5
CD74P04233 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.91□□□□□ -0.5
CD74P04233 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.91□□□□□ -0.5
CD74P04233 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.91□□□□□ -0.5
CD74P04233 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.91□□□□□ -0.5
CD74P04233 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 AL390754.1-201ENST00000619088 582 ntBASIC11.91□□□□□ -0.5
CD74P04233 AC090386.2-201ENST00000623010 1039 ntBASIC11.91□□□□□ -0.5
CD74P04233 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.91□□□□□ -0.5
CD74P04233 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CD74P04233 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.91□□□□□ -0.5
CD74P04233 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC11.91□□□□□ -0.5
CD74P04233 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms