Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC012441.1-201ENST00000446669 685 ntBASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AL132655.2-201ENST00000596276 594 ntBASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC007541.1-201ENST00000570282 1469 ntBASIC17.47■□□□□ 0.39
UPF2Q9HAU5 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC17.47■□□□□ 0.39
UPF2Q9HAU5 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 AL138709.1-201ENST00000614840 1693 ntBASIC17.46■□□□□ 0.39
UPF2Q9HAU5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 BAATP1-201ENST00000412284 1225 ntBASIC17.46■□□□□ 0.39
UPF2Q9HAU5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 AC021016.3-201ENST00000608367 477 ntBASIC17.46■□□□□ 0.39
UPF2Q9HAU5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
UPF2Q9HAU5 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UPF2Q9HAU5 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
UPF2Q9HAU5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.46■□□□□ 0.38
UPF2Q9HAU5 TUBB4AP1-201ENST00000450755 1325 ntBASIC17.46■□□□□ 0.38
UPF2Q9HAU5 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC17.46■□□□□ 0.38
UPF2Q9HAU5 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 AC010970.1-201ENST00000445125 1848 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 AC073869.1-201ENST00000415574 2762 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 CD8B2-202ENST00000417670 633 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 SPTLC1P1-201ENST00000447199 261 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 ELK1P1-201ENST00000485699 580 ntBASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.45■□□□□ 0.38
UPF2Q9HAU5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms