Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC133539.2-201ENST00000604757 467 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC009118.2-201ENST00000613275 655 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 ENPP7P14-201ENST00000621765 1040 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC005252.2-201ENST00000624630 1141 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC108024.1-201ENST00000626286 1721 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC107375.1-201ENST00000564464 2231 ntBASIC11.56□□□□□ -0.56
RAB40CQ96S21 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
RAB40CQ96S21 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
RAB40CQ96S21 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC008620.2-201ENST00000510294 1569 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 UGT1A2P-201ENST00000454886 866 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC055876.2-201ENST00000531834 546 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC009955.4-201ENST00000597192 544 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 LINC02084-201ENST00000606069 1096 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AC025183.3-201ENST00000623526 1482 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 SALL4P6-201ENST00000429385 1691 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.55□□□□□ -0.56
RAB40CQ96S21 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 AL022323.5-201ENST00000624101 2059 ntBASIC11.55□□□□□ -0.56
RAB40CQ96S21 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
RAB40CQ96S21 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.54□□□□□ -0.56
RAB40CQ96S21 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms