Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.27□□□□□ -0.29
PSMD4P55036 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.27□□□□□ -0.29
PSMD4P55036 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 AC011742.3-201ENST00000439053 820 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 AC006033.1-201ENST00000440505 426 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 OR2R1P-201ENST00000441404 914 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 AC104073.2-201ENST00000453737 312 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.27□□□□□ -0.29
PSMD4P55036 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.27□□□□□ -0.29
PSMD4P55036 AP001258.2-201ENST00000529891 490 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.27□□□□□ -0.29
PSMD4P55036 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 AL118558.3-201ENST00000607414 1079 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 AC138649.2-201ENST00000615886 705 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.27□□□□□ -0.29
PSMD4P55036 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.27□□□□□ -0.29
PSMD4P55036 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.27□□□□□ -0.29
PSMD4P55036 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PSMD4P55036 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 CCT8L1P-201ENST00000465400 1674 ntBASIC13.27□□□□□ -0.29
PSMD4P55036 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.27□□□□□ -0.29
PSMD4P55036 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PSMD4P55036 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.26□□□□□ -0.29
PSMD4P55036 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.26□□□□□ -0.29
PSMD4P55036 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.26□□□□□ -0.29
PSMD4P55036 MIR3188-201ENST00000583494 85 ntBASIC13.26□□□□□ -0.29
PSMD4P55036 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.26□□□□□ -0.29
PSMD4P55036 AC107918.4-201ENST00000641966 3141 ntBASIC13.26□□□□□ -0.29
PSMD4P55036 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.26□□□□□ -0.29
PSMD4P55036 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PSMD4P55036 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PSMD4P55036 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms