Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.35□□□□□ -0.11
VCLP18206 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.35□□□□□ -0.11
VCLP18206 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
VCLP18206 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
VCLP18206 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 TCAM1P-207ENST00000485295 1537 ntBASIC14.35□□□□□ -0.11
VCLP18206 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.35□□□□□ -0.11
VCLP18206 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VCLP18206 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.35□□□□□ -0.11
VCLP18206 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 AC144522.1-201ENST00000625111 1658 ntBASIC14.34□□□□□ -0.11
VCLP18206 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 GAS5-209ENST00000430245 723 ntTSL 3 BASIC14.34□□□□□ -0.11
VCLP18206 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.34□□□□□ -0.11
VCLP18206 NKAIN1P1-201ENST00000435754 582 ntBASIC14.34□□□□□ -0.11
VCLP18206 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.34□□□□□ -0.11
VCLP18206 AC104073.2-201ENST00000453737 312 ntBASIC14.34□□□□□ -0.11
VCLP18206 AKR7A2P1-201ENST00000460134 915 ntBASIC14.34□□□□□ -0.11
VCLP18206 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 AL160314.3-201ENST00000556041 767 ntBASIC14.34□□□□□ -0.11
VCLP18206 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.34□□□□□ -0.11
VCLP18206 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VCLP18206 AC100757.4-201ENST00000626934 759 ntBASIC14.34□□□□□ -0.11
VCLP18206 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
VCLP18206 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.34□□□□□ -0.11
VCLP18206 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VCLP18206 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.33□□□□□ -0.11
VCLP18206 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.33□□□□□ -0.11
VCLP18206 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCLP18206 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VCLP18206 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCLP18206 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
VCLP18206 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
VCLP18206 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.33□□□□□ -0.11
VCLP18206 CES1P1-201ENST00000421606 1704 ntBASIC14.33□□□□□ -0.12
VCLP18206 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VCLP18206 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
VCLP18206 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms