Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TOP2AP11388 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TOP2AP11388 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TOP2AP11388 AC105443.1-201ENST00000433754 712 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TOP2AP11388 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC23.79■■□□□ 1.4
TOP2AP11388 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 AC015813.5-201ENST00000624641 1514 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
TOP2AP11388 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC23.79■■□□□ 1.4
TOP2AP11388 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 AC008038.1-201ENST00000634247 1314 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TOP2AP11388 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 RN7SKP255-201ENST00000363442 313 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 RN7SKP203-201ENST00000363618 332 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 RN7SKP71-201ENST00000364558 318 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 7SK.1-201ENST00000365328 331 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC23.79■■□□□ 1.4
TOP2AP11388 AP001120.3-201ENST00000585729 489 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 AL590556.2-202ENST00000636906 844 ntBASIC23.79■■□□□ 1.4
TOP2AP11388 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC23.79■■□□□ 1.4
TOP2AP11388 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TOP2AP11388 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC23.78■■□□□ 1.4
TOP2AP11388 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC23.78■■□□□ 1.4
TOP2AP11388 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TOP2AP11388 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TOP2AP11388 AL031590.1-202ENST00000641466 1737 ntBASIC23.78■■□□□ 1.4
TOP2AP11388 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 ASS1P1-201ENST00000402854 1237 ntBASIC23.78■■□□□ 1.4
TOP2AP11388 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC23.78■■□□□ 1.4
TOP2AP11388 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
TOP2AP11388 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TOP2AP11388 AC233280.19-201ENST00000633223 136 ntBASIC23.78■■□□□ 1.4
TOP2AP11388 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TOP2AP11388 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC23.77■■□□□ 1.4
TOP2AP11388 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 AL591499.1-201ENST00000307155 1153 ntBASIC23.77■■□□□ 1.4
TOP2AP11388 CRIP1P2-201ENST00000425396 228 ntBASIC23.77■■□□□ 1.4
TOP2AP11388 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC23.77■■□□□ 1.4
TOP2AP11388 AC103724.2-201ENST00000520355 476 ntBASIC23.77■■□□□ 1.4
TOP2AP11388 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC23.77■■□□□ 1.4
TOP2AP11388 MIEF2-206ENST00000578174 589 ntTSL 4 BASIC23.77■■□□□ 1.4
TOP2AP11388 RN7SL478P-201ENST00000584358 298 ntBASIC23.77■■□□□ 1.4
TOP2AP11388 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC23.77■■□□□ 1.4
TOP2AP11388 DUX4L33-201ENST00000635217 958 ntBASIC23.77■■□□□ 1.4
TOP2AP11388 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TOP2AP11388 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TOP2AP11388 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
TOP2AP11388 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 CCL25-202ENST00000315626 450 ntTSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC23.76■■□□□ 1.39
TOP2AP11388 SRP9P1-201ENST00000445874 261 ntBASIC23.76■■□□□ 1.39
TOP2AP11388 AC022447.5-201ENST00000504817 392 ntBASIC23.76■■□□□ 1.39
TOP2AP11388 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC23.76■■□□□ 1.39
TOP2AP11388 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TOP2AP11388 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
TOP2AP11388 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms