Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AC092580.1-201ENST00000433998 658 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 FAM58BP-201ENST00000439056 645 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 VDAC1P1-201ENST00000439229 848 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 RPL18P13-201ENST00000478088 569 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AC092299.1-201ENST00000632679 757 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AL139099.5-201ENST00000635274 300 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 MARK2P9-201ENST00000430958 1727 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AC007952.5-201ENST00000572818 1486 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AP002353.1-201ENST00000528257 1599 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC099548.2-209ENST00000480264 625 ntBASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 AC008805.1-201ENST00000590892 364 ntBASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPF3BQ9BZI7 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.96■□□□□ 0.31
UPF3BQ9BZI7 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms