Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 GPR53P-205ENST00000457298 1084 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC021723.1-201ENST00000486306 515 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PGAM1P5-201ENST00000548011 764 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC003686.1-201ENST00000550956 1034 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC010328.2-201ENST00000597698 1111 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC133552.6-201ENST00000613406 534 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AL591471.1-201ENST00000621855 229 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 AC090386.2-201ENST00000623010 1039 ntBASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00346Q8IVM7 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC005252.3-201ENST00000623855 2258 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 KRT18P36-201ENST00000411618 1276 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 MTX1P1-201ENST00000440904 838 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 KRT223P-202ENST00000449164 1292 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC022210.1-201ENST00000449856 793 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 RNMTL1P1-201ENST00000454103 560 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC119751.2-201ENST00000504529 210 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AL512310.5-201ENST00000551999 515 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 DUX4L45-201ENST00000566406 1057 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AGAP12P-201ENST00000585227 2359 ntBASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
LINC00346Q8IVM7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms