Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATP7AQ04656 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 AC144831.1-201ENST00000573312 2656 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 AC140479.7-201ENST00000636301 2332 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 AC090643.2-201ENST00000623442 2029 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 AL031590.1-202ENST00000641466 1737 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 CFL1P6-201ENST00000400899 494 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 AL954722.1-201ENST00000431238 259 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 AC092865.2-201ENST00000439409 971 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 SRP9P1-201ENST00000445874 261 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 RN7SL838P-201ENST00000481676 295 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC20.25■□□□□ 0.83
ATP7AQ04656 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 AL512324.3-201ENST00000619383 882 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 Z82244.1-201ENST00000631502 840 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.25■□□□□ 0.83
ATP7AQ04656 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
ATP7AQ04656 AL390755.1-201ENST00000623716 2027 ntBASIC20.25■□□□□ 0.83
ATP7AQ04656 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATP7AQ04656 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP7AQ04656 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC20.24■□□□□ 0.83
ATP7AQ04656 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 AL591499.1-201ENST00000307155 1153 ntBASIC20.24■□□□□ 0.83
ATP7AQ04656 RNA5SP84-201ENST00000364740 107 ntBASIC20.24■□□□□ 0.83
ATP7AQ04656 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 RBMX2P5-201ENST00000424312 969 ntBASIC20.24■□□□□ 0.83
ATP7AQ04656 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP7AQ04656 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP7AQ04656 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
ATP7AQ04656 RN7SL789P-201ENST00000478944 293 ntBASIC20.24■□□□□ 0.83
ATP7AQ04656 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATP7AQ04656 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP7AQ04656 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP7AQ04656 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC20.24■□□□□ 0.83
ATP7AQ04656 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC20.24■□□□□ 0.83
ATP7AQ04656 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ATP7AQ04656 AL031587.5-201ENST00000624344 1849 ntBASIC20.24■□□□□ 0.83
ATP7AQ04656 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATP7AQ04656 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATP7AQ04656 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC20.23■□□□□ 0.83
ATP7AQ04656 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.23■□□□□ 0.83
ATP7AQ04656 AC002350.2-201ENST00000623894 1828 ntBASIC20.23■□□□□ 0.83
ATP7AQ04656 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 AF186996.6-201ENST00000485294 149 ntBASIC20.23■□□□□ 0.83
ATP7AQ04656 AC090820.1-201ENST00000519722 591 ntBASIC20.23■□□□□ 0.83
ATP7AQ04656 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 COG6-212ENST00000630730 186 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 NME1-209ENST00000511355 1645 ntTSL 5 BASIC20.23■□□□□ 0.83
ATP7AQ04656 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATP7AQ04656 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms