Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CCNA1P78396 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 AC092903.1-201ENST00000466506 262 ntBASIC15.98■□□□□ 0.15
CCNA1P78396 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCNA1P78396 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 RN7SL147P-201ENST00000487345 298 ntBASIC15.98■□□□□ 0.15
CCNA1P78396 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC15.98■□□□□ 0.15
CCNA1P78396 AC087203.1-201ENST00000532111 1181 ntBASIC15.98■□□□□ 0.15
CCNA1P78396 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCNA1P78396 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC15.98■□□□□ 0.15
CCNA1P78396 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CCNA1P78396 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC15.98■□□□□ 0.15
CCNA1P78396 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.98■□□□□ 0.15
CCNA1P78396 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.98■□□□□ 0.15
CCNA1P78396 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCNA1P78396 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 AC023824.1-201ENST00000562945 2975 ntBASIC15.97■□□□□ 0.15
CCNA1P78396 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 AC068760.1-201ENST00000493579 1953 ntBASIC15.97■□□□□ 0.15
CCNA1P78396 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCNA1P78396 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCNA1P78396 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 AL080243.1-201ENST00000423293 1060 ntBASIC15.97■□□□□ 0.15
CCNA1P78396 NME6-208ENST00000435684 599 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 NRADDP-201ENST00000437305 691 ntBASIC15.97■□□□□ 0.15
CCNA1P78396 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC15.97■□□□□ 0.15
CCNA1P78396 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCNA1P78396 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CCNA1P78396 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC15.97■□□□□ 0.15
CCNA1P78396 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
CCNA1P78396 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CCNA1P78396 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CCNA1P78396 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCNA1P78396 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCNA1P78396 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.96■□□□□ 0.15
CCNA1P78396 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCNA1P78396 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 AC022080.1-201ENST00000366255 781 ntBASIC15.96■□□□□ 0.15
CCNA1P78396 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCNA1P78396 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 EEF1DP2-201ENST00000433698 843 ntBASIC15.96■□□□□ 0.15
CCNA1P78396 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNA1P78396 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNA1P78396 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.96■□□□□ 0.15
CCNA1P78396 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CCNA1P78396 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC15.96■□□□□ 0.15
CCNA1P78396 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCNA1P78396 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCNA1P78396 CSTP2-201ENST00000610599 398 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms