Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 AC005014.1-201ENST00000432006 2976 ntBASIC16.59■□□□□ 0.25
NEDD4P46934 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.59■□□□□ 0.25
NEDD4P46934 SIGLEC22P-201ENST00000599104 714 ntBASIC16.59■□□□□ 0.25
NEDD4P46934 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.59■□□□□ 0.25
NEDD4P46934 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 AC006372.4-201ENST00000624122 1543 ntBASIC16.59■□□□□ 0.25
NEDD4P46934 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NEDD4P46934 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.59■□□□□ 0.25
NEDD4P46934 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NEDD4P46934 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NEDD4P46934 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
NEDD4P46934 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.58■□□□□ 0.25
NEDD4P46934 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.58■□□□□ 0.25
NEDD4P46934 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
NEDD4P46934 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NEDD4P46934 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 AL512430.1-201ENST00000392575 860 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 FGFR3P1-201ENST00000449999 601 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 RN7SL788P-201ENST00000460504 316 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.58■□□□□ 0.24
NEDD4P46934 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC16.58■□□□□ 0.24
NEDD4P46934 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.58■□□□□ 0.24
NEDD4P46934 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 AC005632.3-201ENST00000605544 308 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 AC084781.1-201ENST00000613737 656 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NEDD4P46934 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
NEDD4P46934 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.58■□□□□ 0.24
NEDD4P46934 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 TBC1D27-202ENST00000424239 1573 ntBASIC16.58■□□□□ 0.24
NEDD4P46934 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEDD4P46934 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.57■□□□□ 0.24
NEDD4P46934 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEDD4P46934 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC16.57■□□□□ 0.24
NEDD4P46934 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms