Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
MMP13P45452 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.8□□□□□ -0.04
MMP13P45452 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.8□□□□□ -0.04
MMP13P45452 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
MMP13P45452 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MMP13P45452 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MMP13P45452 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP13P45452 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP13P45452 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP13P45452 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP13P45452 RPL18P13-201ENST00000478088 569 ntBASIC14.79□□□□□ -0.04
MMP13P45452 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.79□□□□□ -0.04
MMP13P45452 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 RN7SL219P-201ENST00000582872 296 ntBASIC14.79□□□□□ -0.04
MMP13P45452 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 BNIP3P13-201ENST00000599968 566 ntBASIC14.79□□□□□ -0.04
MMP13P45452 AC104506.1-201ENST00000609247 429 ntBASIC14.79□□□□□ -0.04
MMP13P45452 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MMP13P45452 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 AC133540.1-201ENST00000620845 1019 ntBASIC14.79□□□□□ -0.04
MMP13P45452 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
MMP13P45452 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP13P45452 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP13P45452 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
MMP13P45452 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
MMP13P45452 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.79□□□□□ -0.04
MMP13P45452 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.79□□□□□ -0.04
MMP13P45452 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 AC004899.1-201ENST00000424687 1714 ntBASIC14.78□□□□□ -0.04
MMP13P45452 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 CYP4F23P-201ENST00000593402 1579 ntBASIC14.78□□□□□ -0.04
MMP13P45452 AC018735.1-201ENST00000437208 1502 ntBASIC14.78□□□□□ -0.04
MMP13P45452 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
MMP13P45452 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP13P45452 ACTBP11-201ENST00000436287 1126 ntBASIC14.78□□□□□ -0.04
MMP13P45452 AC244107.1-201ENST00000442033 332 ntBASIC14.78□□□□□ -0.04
MMP13P45452 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 AC104306.2-201ENST00000451877 341 ntBASIC14.78□□□□□ -0.04
MMP13P45452 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.78□□□□□ -0.04
MMP13P45452 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.78□□□□□ -0.04
MMP13P45452 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.78□□□□□ -0.04
MMP13P45452 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms