Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.95■□□□□ 0.46
RXRBP28702 FAM90A27P-201ENST00000593323 1370 ntBASIC17.95■□□□□ 0.46
RXRBP28702 FAM90A28P-202ENST00000597191 1374 ntBASIC17.95■□□□□ 0.46
RXRBP28702 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC17.95■□□□□ 0.46
RXRBP28702 HNRNPA1P9-201ENST00000450624 950 ntBASIC17.95■□□□□ 0.46
RXRBP28702 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RXRBP28702 RPSAP5-201ENST00000485258 884 ntBASIC17.95■□□□□ 0.46
RXRBP28702 DDX11L8-201ENST00000535849 366 ntBASIC17.95■□□□□ 0.46
RXRBP28702 AC063924.1-201ENST00000546680 673 ntBASIC17.95■□□□□ 0.46
RXRBP28702 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 AC010601.2-201ENST00000623060 774 ntBASIC17.95■□□□□ 0.46
RXRBP28702 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.95■□□□□ 0.46
RXRBP28702 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 AC215219.1-201ENST00000400706 1817 ntBASIC17.95■□□□□ 0.46
RXRBP28702 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 AC112693.3-201ENST00000624819 1983 ntBASIC17.95■□□□□ 0.46
RXRBP28702 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RXRBP28702 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.95■□□□□ 0.46
RXRBP28702 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
RXRBP28702 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RXRBP28702 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC17.94■□□□□ 0.46
RXRBP28702 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RXRBP28702 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RXRBP28702 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 AC068760.1-201ENST00000493579 1953 ntBASIC17.94■□□□□ 0.46
RXRBP28702 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 SNORA50D-201ENST00000408059 134 ntBASIC17.94■□□□□ 0.46
RXRBP28702 AC096677.3-201ENST00000413162 387 ntBASIC17.94■□□□□ 0.46
RXRBP28702 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC17.94■□□□□ 0.46
RXRBP28702 AQP7-207ENST00000447660 998 ntTSL 2 BASIC17.94■□□□□ 0.46
RXRBP28702 PFN1P10-201ENST00000455962 327 ntBASIC17.94■□□□□ 0.46
RXRBP28702 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC17.94■□□□□ 0.46
RXRBP28702 OARD1-214ENST00000486443 764 ntTSL 3 BASIC17.94■□□□□ 0.46
RXRBP28702 AC108082.1-201ENST00000510857 331 ntBASIC17.94■□□□□ 0.46
RXRBP28702 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC17.94■□□□□ 0.46
RXRBP28702 AC017100.1-201ENST00000565978 1169 ntBASIC17.94■□□□□ 0.46
RXRBP28702 MT1G-204ENST00000569500 305 ntTSL 3 BASIC17.94■□□□□ 0.46
RXRBP28702 AC123595.2-201ENST00000607854 549 ntTSL 4 BASIC17.94■□□□□ 0.46
RXRBP28702 AC117500.5-201ENST00000623233 527 ntBASIC17.94■□□□□ 0.46
RXRBP28702 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.94■□□□□ 0.46
RXRBP28702 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RXRBP28702 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.94■□□□□ 0.46
RXRBP28702 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 MYADML-201ENST00000474610 2147 ntBASIC17.93■□□□□ 0.46
RXRBP28702 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.93■□□□□ 0.46
RXRBP28702 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RXRBP28702 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 AC024475.2-201ENST00000312173 879 ntBASIC17.93■□□□□ 0.46
RXRBP28702 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 RNA5SP407-201ENST00000410275 110 ntBASIC17.93■□□□□ 0.46
RXRBP28702 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RXRBP28702 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC17.93■□□□□ 0.46
RXRBP28702 RPL35P1-201ENST00000450819 370 ntBASIC17.93■□□□□ 0.46
RXRBP28702 ALG1L14P-201ENST00000514230 434 ntBASIC17.93■□□□□ 0.46
RXRBP28702 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC17.93■□□□□ 0.46
RXRBP28702 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RXRBP28702 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC17.93■□□□□ 0.46
RXRBP28702 UBA3-212ENST00000630585 390 ntTSL 4 BASIC17.93■□□□□ 0.46
RXRBP28702 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RXRBP28702 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RXRBP28702 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms