Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 AC005252.3-201ENST00000623855 2258 ntBASIC13.11□□□□□ -0.31
THBS1P07996 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 TCAF1P1-201ENST00000414990 2232 ntBASIC13.11□□□□□ -0.31
THBS1P07996 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 MIR1247-201ENST00000408206 136 ntBASIC13.11□□□□□ -0.31
THBS1P07996 BTBD6P1-201ENST00000412176 1267 ntBASIC13.11□□□□□ -0.31
THBS1P07996 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.11□□□□□ -0.31
THBS1P07996 AC078875.1-201ENST00000431907 724 ntBASIC13.11□□□□□ -0.31
THBS1P07996 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 RNMTL1P1-201ENST00000454103 560 ntBASIC13.11□□□□□ -0.31
THBS1P07996 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.11□□□□□ -0.31
THBS1P07996 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.11□□□□□ -0.31
THBS1P07996 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.11□□□□□ -0.31
THBS1P07996 RN7SL560P-201ENST00000577943 264 ntBASIC13.11□□□□□ -0.31
THBS1P07996 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.11□□□□□ -0.31
THBS1P07996 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 AC009542.2-202ENST00000619004 1067 ntBASIC13.11□□□□□ -0.31
THBS1P07996 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.11□□□□□ -0.31
THBS1P07996 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.11□□□□□ -0.31
THBS1P07996 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 AC079781.5-202ENST00000641784 3743 ntBASIC13.11□□□□□ -0.31
THBS1P07996 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.11□□□□□ -0.31
THBS1P07996 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
THBS1P07996 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 AC004899.1-201ENST00000424687 1714 ntBASIC13.1□□□□□ -0.31
THBS1P07996 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 CICP17-201ENST00000418553 2377 ntBASIC13.1□□□□□ -0.31
THBS1P07996 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 AL359845.1-201ENST00000458202 1648 ntBASIC13.1□□□□□ -0.31
THBS1P07996 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
THBS1P07996 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.1□□□□□ -0.31
THBS1P07996 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.1□□□□□ -0.31
THBS1P07996 GOLGA2P4-201ENST00000441462 777 ntBASIC13.1□□□□□ -0.31
THBS1P07996 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.1□□□□□ -0.31
THBS1P07996 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
THBS1P07996 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.1□□□□□ -0.31
THBS1P07996 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 AL136295.7-201ENST00000619226 1200 ntBASIC13.1□□□□□ -0.31
THBS1P07996 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.1□□□□□ -0.31
THBS1P07996 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
THBS1P07996 LINC01815-202ENST00000641468 1409 ntBASIC13.1□□□□□ -0.31
THBS1P07996 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.1□□□□□ -0.31
THBS1P07996 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms