Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 AC134915.1-201ENST00000426461 574 ntBASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 SRD5A3P1-201ENST00000603021 949 ntBASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMGB1P1B2RPK0 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 FKBP4P6-201ENST00000457486 1332 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AL031432.4-201ENST00000641729 2190 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 KRT18P13-201ENST00000400056 1290 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 C1QBPP1-201ENST00000400117 770 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 YBX1P5-201ENST00000509441 847 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 OR2I1P-208ENST00000641137 4948 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 HNRNPMP1-201ENST00000560685 1768 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 TRIM80P-201ENST00000455685 2848 ntBASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMGB1P1B2RPK0 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC14.41□□□□□ -0.1
HMGB1P1B2RPK0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms