Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
GOLGA6L4A6NEF3 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 ARSD-202ENST00000381154 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 AL354989.2-201ENST00000435838 1540 ntBASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.47■□□□□ 0.23
GOLGA6L4A6NEF3 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 DGCR5-201ENST00000399539 862 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AL590640.2-201ENST00000457038 527 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AP001889.1-201ENST00000525414 633 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AC021016.3-201ENST00000608367 477 ntBASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
GOLGA6L4A6NEF3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 210.4 ms