Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CHCHD2P2-201ENST00000503744 321 ntBASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 MIR2392-201ENST00000584881 84 ntBASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 REXO1L1P-201ENST00000379010 6598 ntBASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 AL590824.1-201ENST00000403828 1349 ntBASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CTDP1Q9Y5B0 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 BX679664.3-201ENST00000414070 555 ntBASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 DPY19L2P5-201ENST00000456300 331 ntBASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 AC113935.1-201ENST00000471722 555 ntBASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 AC005740.1-201ENST00000515639 522 ntBASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 DBP-202ENST00000593500 712 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTDP1Q9Y5B0 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTDP1Q9Y5B0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CTDP1Q9Y5B0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTDP1Q9Y5B0 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTDP1Q9Y5B0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms