Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 REXO1L1P-201ENST00000379010 6598 ntBASIC9.95□□□□□ -0.82
UBE2D4Q9Y2X8 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01165-201ENST00000445190 1623 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LAP3P2-201ENST00000454686 1454 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LBH-203ENST00000404397 543 ntTSL 4 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 OR10B1P-201ENST00000601666 907 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 CHCHD2P3-201ENST00000603038 451 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 AC021016.3-201ENST00000608367 477 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 WFDC1-204ENST00000613603 549 ntBASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC9.94□□□□□ -0.82
UBE2D4Q9Y2X8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 AC026271.4-201ENST00000578214 1833 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 SALL4P6-201ENST00000429385 1691 ntBASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC9.93□□□□□ -0.82
UBE2D4Q9Y2X8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms