Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CNTNAP3Q9BZ76 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNTNAP3Q9BZ76 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CNTNAP3Q9BZ76 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC079325.1-201ENST00000430386 857 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AL603841.1-201ENST00000430516 664 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 OR2R1P-201ENST00000441404 914 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AL035414.1-201ENST00000451327 857 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC099343.1-201ENST00000513481 609 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC087203.1-201ENST00000532111 1181 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 MIR4746-201ENST00000579802 71 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 URAHP-205ENST00000610227 398 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 BX322534.1-201ENST00000635574 241 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC215524.1-201ENST00000635696 241 ntBASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.54□□□□□ -0.24
CNTNAP3Q9BZ76 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 OR7E115P-201ENST00000382617 1024 ntBASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 RN7SL375P-201ENST00000492442 298 ntBASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC112694.1-202ENST00000540985 943 ntBASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 GAS7-216ENST00000583882 553 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AL158211.2-201ENST00000607282 395 ntBASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CNTNAP3Q9BZ76 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms