Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 MIR1247-201ENST00000408206 136 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AC022137.2-201ENST00000503482 481 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AC026410.3-201ENST00000514280 936 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 SORD2P-201ENST00000558556 1069 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 PRSS30P-206ENST00000641773 873 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 C2-206ENST00000442278 2434 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AL139094.1-201ENST00000405549 1188 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 C2orf27AP3-201ENST00000434123 579 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC022616.1-201ENST00000518688 554 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AP001582.1-201ENST00000525856 295 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC131206.1-201ENST00000538078 1211 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AL354718.3-201ENST00000616414 581 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 CR382287.1-201ENST00000623954 586 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 AC008687.7-202ENST00000637404 953 ntBASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRIM55Q9BYV6 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRIM55Q9BYV6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms