Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ATG4DQ86TL0 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.88□□□□□ -0.35
ATG4DQ86TL0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AL139158.3-201ENST00000641212 1562 ntBASIC12.87□□□□□ -0.35
ATG4DQ86TL0 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 CYP46A4P-201ENST00000414953 267 ntBASIC12.87□□□□□ -0.35
ATG4DQ86TL0 SLC25A24P2-201ENST00000415059 510 ntBASIC12.87□□□□□ -0.35
ATG4DQ86TL0 SPTLC1P5-201ENST00000450718 252 ntBASIC12.87□□□□□ -0.35
ATG4DQ86TL0 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AC125604.1-201ENST00000496255 707 ntBASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ATG4DQ86TL0 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AC135782.3-201ENST00000562782 2105 ntBASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 KRT8P21-201ENST00000430398 1491 ntBASIC12.86□□□□□ -0.35
ATG4DQ86TL0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 ACTG1P2-201ENST00000415776 1125 ntBASIC12.86□□□□□ -0.35
ATG4DQ86TL0 ACTG1P11-201ENST00000425411 1125 ntBASIC12.86□□□□□ -0.35
ATG4DQ86TL0 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 NDUFV2P1-201ENST00000596415 907 ntBASIC12.86□□□□□ -0.35
ATG4DQ86TL0 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC12.86□□□□□ -0.35
ATG4DQ86TL0 AC138649.2-201ENST00000615886 705 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms