Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC139143.1-201ENST00000441772 1207 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 RN7SL578P-201ENST00000477781 283 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC131206.1-201ENST00000538078 1211 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC120498.7-201ENST00000562876 330 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 TRMT112P3-201ENST00000580149 358 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 AC022532.1-201ENST00000624563 1728 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 MYO15B-237ENST00000642007 4893 ntBASIC11.9□□□□□ -0.5
RIPPLY3P57055 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.9□□□□□ -0.5
RIPPLY3P57055 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RIPPLY3P57055 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
RIPPLY3P57055 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.9□□□□□ -0.51
RIPPLY3P57055 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.9□□□□□ -0.51
RIPPLY3P57055 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RIPPLY3P57055 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.51
RIPPLY3P57055 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC106785.2-201ENST00000564385 1319 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 ASS1P1-201ENST00000402854 1237 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 AL627095.1-201ENST00000414775 321 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 KRT18P4-201ENST00000422599 1288 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC004910.1-201ENST00000433493 787 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC098934.1-203ENST00000442868 1262 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 KLF2P1-201ENST00000447438 1042 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 RNA5SP406-201ENST00000516106 112 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 F11R-204ENST00000537746 1245 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC023968.2-201ENST00000560593 1049 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 TYMSP2-201ENST00000589501 424 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 AC008825.2-201ENST00000603374 718 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 GGT3P-204ENST00000453783 1664 ntBASIC11.89□□□□□ -0.51
RIPPLY3P57055 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RIPPLY3P57055 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RIPPLY3P57055 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms