Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 AC138951.2-201ENST00000623455 1161 ntBASIC13.02□□□□□ -0.33
CENPAP49450 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CENPAP49450 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CENPAP49450 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CENPAP49450 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.01□□□□□ -0.33
CENPAP49450 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.01□□□□□ -0.33
CENPAP49450 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CENPAP49450 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.01□□□□□ -0.33
CENPAP49450 AC132938.2-201ENST00000579188 680 ntBASIC13.01□□□□□ -0.33
CENPAP49450 KRT18P8-201ENST00000581937 1246 ntBASIC13.01□□□□□ -0.33
CENPAP49450 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 AC233724.13-201ENST00000598383 410 ntBASIC13.01□□□□□ -0.33
CENPAP49450 AC104506.1-201ENST00000609247 429 ntBASIC13.01□□□□□ -0.33
CENPAP49450 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 AL591163.1-201ENST00000641757 987 ntBASIC13.01□□□□□ -0.33
CENPAP49450 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 CES1P1-201ENST00000421606 1704 ntBASIC13.01□□□□□ -0.33
CENPAP49450 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.01□□□□□ -0.33
CENPAP49450 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CENPAP49450 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CENPAP49450 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.01□□□□□ -0.33
CENPAP49450 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CENPAP49450 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CENPAP49450 AC111170.3-201ENST00000624282 2464 ntBASIC13□□□□□ -0.33
CENPAP49450 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13□□□□□ -0.33
CENPAP49450 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13□□□□□ -0.33
CENPAP49450 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13□□□□□ -0.33
CENPAP49450 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13□□□□□ -0.33
CENPAP49450 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms