Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 RN7SKP214-201ENST00000364208 315 ntBASIC14.05□□□□□ -0.16
CDH3P22223 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH3P22223 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 AC090857.1-201ENST00000527400 390 ntBASIC14.05□□□□□ -0.16
CDH3P22223 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.05□□□□□ -0.16
CDH3P22223 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 RN7SL774P-201ENST00000577467 290 ntBASIC14.05□□□□□ -0.16
CDH3P22223 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.05□□□□□ -0.16
CDH3P22223 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CDH3P22223 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.05□□□□□ -0.16
CDH3P22223 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
CDH3P22223 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CDH3P22223 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDH3P22223 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
CDH3P22223 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.05□□□□□ -0.16
CDH3P22223 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 AL354702.1-201ENST00000442006 1960 ntBASIC14.04□□□□□ -0.16
CDH3P22223 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.04□□□□□ -0.16
CDH3P22223 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 AL662890.1-201ENST00000396818 632 ntBASIC14.04□□□□□ -0.16
CDH3P22223 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 AC078875.1-201ENST00000431907 724 ntBASIC14.04□□□□□ -0.16
CDH3P22223 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH3P22223 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH3P22223 AP001505.2-201ENST00000616815 443 ntBASIC14.04□□□□□ -0.16
CDH3P22223 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH3P22223 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CDH3P22223 CYP4F23P-201ENST00000593402 1579 ntBASIC14.04□□□□□ -0.16
CDH3P22223 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH3P22223 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH3P22223 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH3P22223 AC097359.2-201ENST00000604992 2389 ntBASIC14.03□□□□□ -0.16
CDH3P22223 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH3P22223 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH3P22223 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms