Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
BMP4P12644 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
BMP4P12644 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 AL355994.2-201ENST00000447882 704 ntBASIC13.16□□□□□ -0.3
BMP4P12644 CSF2RBP1-201ENST00000447905 391 ntBASIC13.16□□□□□ -0.3
BMP4P12644 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 FTH1P14-201ENST00000482930 551 ntBASIC13.16□□□□□ -0.3
BMP4P12644 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 AP000240.1-201ENST00000609910 452 ntBASIC13.16□□□□□ -0.3
BMP4P12644 RPSAP52-203ENST00000622976 1023 ntBASIC13.16□□□□□ -0.3
BMP4P12644 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 PEG13-201ENST00000631594 5667 ntBASIC13.16□□□□□ -0.3
BMP4P12644 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BMP4P12644 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.15□□□□□ -0.3
BMP4P12644 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 KRT8P35-201ENST00000483942 1338 ntBASIC13.15□□□□□ -0.3
BMP4P12644 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.15□□□□□ -0.3
BMP4P12644 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.15□□□□□ -0.3
BMP4P12644 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BMP4P12644 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BMP4P12644 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.15□□□□□ -0.3
BMP4P12644 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.15□□□□□ -0.3
BMP4P12644 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.15□□□□□ -0.3
BMP4P12644 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
BMP4P12644 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.15□□□□□ -0.3
BMP4P12644 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BMP4P12644 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BMP4P12644 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BMP4P12644 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BMP4P12644 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms