Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 AL139158.3-201ENST00000641212 1562 ntBASIC14.85□□□□□ -0.03
RB1P06400 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.85□□□□□ -0.03
RB1P06400 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
RB1P06400 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RB1P06400 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 AC023141.7-201ENST00000430646 407 ntBASIC14.85□□□□□ -0.03
RB1P06400 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 AC027612.2-202ENST00000445955 1199 ntBASIC14.85□□□□□ -0.03
RB1P06400 AC025594.1-201ENST00000469533 543 ntBASIC14.85□□□□□ -0.03
RB1P06400 MIR2278-201ENST00000516344 96 ntBASIC14.85□□□□□ -0.03
RB1P06400 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 GGNBP1-204ENST00000613113 887 ntBASIC14.85□□□□□ -0.03
RB1P06400 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.85□□□□□ -0.03
RB1P06400 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.85□□□□□ -0.03
RB1P06400 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RB1P06400 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RB1P06400 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RB1P06400 WASH7P-201ENST00000488147 1351 ntBASIC14.85□□□□□ -0.03
RB1P06400 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 SALL4P6-201ENST00000429385 1691 ntBASIC14.84□□□□□ -0.03
RB1P06400 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 AC106827.1-201ENST00000366454 431 ntBASIC14.84□□□□□ -0.03
RB1P06400 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.84□□□□□ -0.03
RB1P06400 EEF1DP2-201ENST00000433698 843 ntBASIC14.84□□□□□ -0.03
RB1P06400 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 CDCA4P4-201ENST00000435216 680 ntBASIC14.84□□□□□ -0.03
RB1P06400 RPSAP12-201ENST00000435879 888 ntBASIC14.84□□□□□ -0.03
RB1P06400 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 AC022447.6-201ENST00000515522 438 ntBASIC14.84□□□□□ -0.03
RB1P06400 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.84□□□□□ -0.03
RB1P06400 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC14.84□□□□□ -0.03
RB1P06400 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.84□□□□□ -0.03
RB1P06400 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 AL161772.1-201ENST00000610494 4412 ntBASIC14.84□□□□□ -0.03
RB1P06400 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RB1P06400 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.84□□□□□ -0.03
RB1P06400 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms