Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AKR1C6P-201ENST00000432950 983 ntBASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AC131235.2-201ENST00000445553 1057 ntBASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 RN7SL479P-201ENST00000472003 300 ntBASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 HYMAI-201ENST00000635591 3347 ntBASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM88BA6NKF7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC026691.1-201ENST00000602502 2017 ntBASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 TMBIM7P-203ENST00000641617 1718 ntBASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC098591.1-202ENST00000507914 937 ntBASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 RN7SL134P-201ENST00000579756 303 ntBASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM88BA6NKF7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM88BA6NKF7 CACYBPP3-201ENST00000406011 625 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms