Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 FAM58BP-201ENST00000439056 645 ntBASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 ST13P19-201ENST00000442505 1124 ntBASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 TTTY23B-201ENST00000442790 549 ntBASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AC007551.1-201ENST00000457394 519 ntBASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 DUX4L46-201ENST00000566845 751 ntBASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
POLR2J2Q9GZM3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AC092053.3-201ENST00000641308 4975 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL391647.1-201ENST00000395664 511 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL512384.1-201ENST00000406683 331 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL157407.1-201ENST00000435784 904 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PPY2P-201ENST00000582808 702 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AC009474.1-201ENST00000455096 1565 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PDIA3P1-201ENST00000471856 1510 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 BEND3P3-201ENST00000611030 2440 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 KRT8P4-201ENST00000509735 1454 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AL445209.1-201ENST00000607269 3491 ntBASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.22□□□□□ -0.29
POLR2J2Q9GZM3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms