Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 PFN1P12-201ENST00000455938 534 ntBASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 AC107373.2-201ENST00000607735 490 ntBASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 RHOXF1P1-202ENST00000635473 501 ntBASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.49□□□□□ -0.09
TRIM55Q9BYV6 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC026434.2-201ENST00000506094 1078 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ZNF767P-206ENST00000513792 565 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC079316.1-201ENST00000548397 411 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 RN7SL560P-201ENST00000577943 264 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 MIR3615-201ENST00000581999 87 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC103810.3-201ENST00000583567 96 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC068587.10-201ENST00000641210 219 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AP002761.4-201ENST00000565433 3361 ntBASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRIM55Q9BYV6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AL445209.1-201ENST00000607269 3491 ntBASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.47□□□□□ -0.09
TRIM55Q9BYV6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms