Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
VBP1P61758 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.78□□□□□ -0.36
VBP1P61758 AC026410.3-201ENST00000514280 936 ntBASIC12.78□□□□□ -0.36
VBP1P61758 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 AC005586.2-201ENST00000563946 837 ntBASIC12.78□□□□□ -0.36
VBP1P61758 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.78□□□□□ -0.36
VBP1P61758 CR392039.2-201ENST00000623182 509 ntBASIC12.78□□□□□ -0.36
VBP1P61758 AL158212.4-201ENST00000624062 1286 ntBASIC12.78□□□□□ -0.36
VBP1P61758 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.78□□□□□ -0.36
VBP1P61758 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 CPT1C-217ENST00000598293 2767 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
VBP1P61758 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VBP1P61758 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
VBP1P61758 GRM4-209ENST00000609222 3176 ntTSL 2 BASIC12.77□□□□□ -0.36
VBP1P61758 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.77□□□□□ -0.36
VBP1P61758 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
VBP1P61758 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VBP1P61758 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VBP1P61758 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
VBP1P61758 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.77□□□□□ -0.36
VBP1P61758 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
VBP1P61758 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.77□□□□□ -0.36
VBP1P61758 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 RN7SKP230-201ENST00000365642 335 ntBASIC12.77□□□□□ -0.37
VBP1P61758 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 RBPMS2P1-201ENST00000437762 623 ntBASIC12.77□□□□□ -0.37
VBP1P61758 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
VBP1P61758 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.77□□□□□ -0.37
VBP1P61758 AC010336.2-201ENST00000564226 506 ntBASIC12.77□□□□□ -0.37
VBP1P61758 AC051619.7-201ENST00000568314 623 ntBASIC12.77□□□□□ -0.37
VBP1P61758 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
VBP1P61758 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
VBP1P61758 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
VBP1P61758 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.77□□□□□ -0.37
VBP1P61758 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.77□□□□□ -0.37
VBP1P61758 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 GRIK5-202ENST00000301218 3310 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 SALL4P6-201ENST00000429385 1691 ntBASIC12.77□□□□□ -0.37
VBP1P61758 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
VBP1P61758 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VBP1P61758 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
VBP1P61758 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.76□□□□□ -0.37
VBP1P61758 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
VBP1P61758 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.76□□□□□ -0.37
VBP1P61758 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.76□□□□□ -0.37
VBP1P61758 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.76□□□□□ -0.37
VBP1P61758 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VBP1P61758 HSPA8P9-201ENST00000485881 1943 ntBASIC12.76□□□□□ -0.37
VBP1P61758 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC12.76□□□□□ -0.37
VBP1P61758 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
VBP1P61758 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
VBP1P61758 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms