Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 EMC4-208ENST00000559078 599 ntTSL 3 BASIC13.18□□□□□ -0.3
BMP4P12644 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.18□□□□□ -0.3
BMP4P12644 RN7SL219P-201ENST00000582872 296 ntBASIC13.18□□□□□ -0.3
BMP4P12644 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.18□□□□□ -0.3
BMP4P12644 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.18□□□□□ -0.3
BMP4P12644 AC132938.4-201ENST00000623835 848 ntBASIC13.18□□□□□ -0.3
BMP4P12644 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
BMP4P12644 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.18□□□□□ -0.3
BMP4P12644 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.18□□□□□ -0.3
BMP4P12644 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 AL645937.2-201ENST00000396808 931 ntBASIC13.17□□□□□ -0.3
BMP4P12644 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
BMP4P12644 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 PFN1P12-201ENST00000455938 534 ntBASIC13.17□□□□□ -0.3
BMP4P12644 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.17□□□□□ -0.3
BMP4P12644 AC004066.1-201ENST00000502488 802 ntBASIC13.17□□□□□ -0.3
BMP4P12644 AC092658.1-201ENST00000505836 891 ntBASIC13.17□□□□□ -0.3
BMP4P12644 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.17□□□□□ -0.3
BMP4P12644 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.17□□□□□ -0.3
BMP4P12644 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 AC010328.2-201ENST00000597698 1111 ntBASIC13.17□□□□□ -0.3
BMP4P12644 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
BMP4P12644 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
BMP4P12644 AC011840.2-201ENST00000563063 1520 ntBASIC13.17□□□□□ -0.3
BMP4P12644 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.17□□□□□ -0.3
BMP4P12644 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
BMP4P12644 AC024075.2-201ENST00000598112 1473 ntBASIC13.16□□□□□ -0.3
BMP4P12644 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 TUBB1P2-201ENST00000422712 1306 ntBASIC13.16□□□□□ -0.3
BMP4P12644 TUBB1P1-201ENST00000503144 1300 ntBASIC13.16□□□□□ -0.3
BMP4P12644 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.16□□□□□ -0.3
BMP4P12644 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
BMP4P12644 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC13.16□□□□□ -0.3
BMP4P12644 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BMP4P12644 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms