Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 KRT8P4-201ENST00000509735 1454 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 MIR1202-201ENST00000408529 83 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 HMGN1P19-201ENST00000436976 333 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 RHOXF1P1-202ENST00000635473 501 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 AL731571.1-201ENST00000617058 5428 ntBASIC13.44□□□□□ -0.26
IFT52Q9Y366 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.44□□□□□ -0.26
IFT52Q9Y366 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
IFT52Q9Y366 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 TMEM14DP-201ENST00000422205 345 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 CHMP1AP1-201ENST00000445563 662 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 C2orf69P2-201ENST00000562032 1123 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 AL022313.4-201ENST00000562756 2046 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 PPY2P-201ENST00000582808 702 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 NPTN-IT1-201ENST00000628401 2283 ntBASIC13.43□□□□□ -0.26
IFT52Q9Y366 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
IFT52Q9Y366 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
IFT52Q9Y366 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms