Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.41□□□□□ -0.26
CHMP24386 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.41□□□□□ -0.26
CHMP24386 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 AL022328.3-201ENST00000607943 679 ntBASIC13.41□□□□□ -0.26
CHMP24386 AC139712.1-201ENST00000378256 1875 ntBASIC13.41□□□□□ -0.26
CHMP24386 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 AL731571.1-201ENST00000617058 5428 ntBASIC13.41□□□□□ -0.26
CHMP24386 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 SHC1P1-201ENST00000425230 1745 ntBASIC13.41□□□□□ -0.26
CHMP24386 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 AC009093.2-202ENST00000620513 2079 ntBASIC13.41□□□□□ -0.26
CHMP24386 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.41□□□□□ -0.26
CHMP24386 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.41□□□□□ -0.26
CHMP24386 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CHMP24386 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.41□□□□□ -0.26
CHMP24386 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CHMP24386 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 TUBB8P4-201ENST00000511806 1324 ntBASIC13.4□□□□□ -0.26
CHMP24386 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 KHSRPP1-201ENST00000427983 1768 ntBASIC13.4□□□□□ -0.26
CHMP24386 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.4□□□□□ -0.26
CHMP24386 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CHMP24386 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 AC006033.1-201ENST00000440505 426 ntBASIC13.4□□□□□ -0.26
CHMP24386 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.4□□□□□ -0.26
CHMP24386 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.4□□□□□ -0.26
CHMP24386 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 AC104982.3-201ENST00000581995 514 ntBASIC13.4□□□□□ -0.26
CHMP24386 AC005695.3-201ENST00000614522 232 ntBASIC13.4□□□□□ -0.26
CHMP24386 AL096828.3-201ENST00000615354 462 ntBASIC13.4□□□□□ -0.26
CHMP24386 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
CHMP24386 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CHMP24386 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CHMP24386 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHMP24386 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHMP24386 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CHMP24386 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CHMP24386 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms