Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
POLR1DQ9Y2S0 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AP000812.2-201ENST00000538934 718 ntBASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 CR383656.12-201ENST00000549567 513 ntBASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 AC104581.4-201ENST00000623126 3052 ntBASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
POLR1DQ9Y2S0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MIR497HG-202ENST00000572453 3838 ntBASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 AC090643.2-201ENST00000623442 2029 ntBASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
POLR1DQ9Y2S0 AC010141.1-201ENST00000411585 623 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms