Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC011840.2-201ENST00000563063 1520 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AL008707.1-201ENST00000422498 534 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC104073.2-201ENST00000453737 312 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 TUBB8P8-201ENST00000458717 1058 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC005740.2-201ENST00000511085 419 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 RN7SL190P-201ENST00000582519 257 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC026740.1-201ENST00000607068 791 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC002472.3-201ENST00000640124 621 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC004899.1-201ENST00000424687 1714 ntBASIC15.12■□□□□ 0.01
CD248Q9HCU0 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CD248Q9HCU0 AC008132.1-202ENST00000342005 1389 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC131902.2-201ENST00000566892 2172 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 PCDHB18P-202ENST00000526308 3197 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC091046.1-201ENST00000331871 207 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 MIR769-201ENST00000390225 118 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 ACTG1P2-201ENST00000415776 1125 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 ACTG1P11-201ENST00000425411 1125 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 MARK2P5-201ENST00000507649 634 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AF254983.2-201ENST00000612331 135 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 AL136301.1-201ENST00000615830 422 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 AC020910.5-201ENST00000623668 1865 ntBASIC15.11■□□□□ 0.01
CD248Q9HCU0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC15.11■□□□□ 0.01
CD248Q9HCU0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CD248Q9HCU0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms