Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CCT8L1P-201ENST00000465400 1674 ntBASIC17.07■□□□□ 0.32
UPF3BQ9BZI7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPF3BQ9BZI7 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AL445209.1-201ENST00000607269 3491 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 CSF2RBP1-201ENST00000447905 391 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AC006122.1-201ENST00000493323 440 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AC003686.1-201ENST00000550956 1034 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 RN7SL190P-201ENST00000582519 257 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AC244157.2-201ENST00000616239 1006 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 COL6A4P2-202ENST00000504443 2753 ntBASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPF3BQ9BZI7 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 AL354877.1-201ENST00000424412 413 ntBASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 AC019294.4-201ENST00000561777 2905 ntBASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UPF3BQ9BZI7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 GALC-206ENST00000544807 2528 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC17.04■□□□□ 0.32
UPF3BQ9BZI7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms