Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 RPL23AP68-201ENST00000480924 445 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC100850.1-201ENST00000506768 649 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 UCHL1-AS1-202ENST00000510073 451 ntTSL 3 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AP003171.2-201ENST00000528208 925 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 RN7SL163P-201ENST00000583100 276 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC004466.1-201ENST00000599515 1080 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 RPL21P136-201ENST00000605378 396 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 AP000346.4-201ENST00000614827 381 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC100757.4-201ENST00000626934 759 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 AC003102.2-201ENST00000589195 1469 ntBASIC13.02□□□□□ -0.33
USB1Q9BQ65 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
USB1Q9BQ65 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
USB1Q9BQ65 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AJ011931.1-201ENST00000618749 2492 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 CALR4P-201ENST00000431943 946 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AKR7A2P1-201ENST00000460134 915 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC100827.2-201ENST00000563214 1194 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC009884.2-201ENST00000603110 324 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC007620.3-201ENST00000608131 497 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 AL358472.3-201ENST00000608147 415 ntBASIC13.01□□□□□ -0.33
USB1Q9BQ65 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
USB1Q9BQ65 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
USB1Q9BQ65 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms