Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPS9-213ENST00000626547 476 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 RNA5SP407-201ENST00000410275 110 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 IGHV7-56-201ENST00000518372 351 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 SAA2-206ENST00000530400 323 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 TLE2-205ENST00000586422 389 ntTSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AJ011931.1-201ENST00000618749 2492 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC124319.4-201ENST00000622931 2161 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AL391903.1-201ENST00000407513 365 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 RAB42P1-201ENST00000555078 316 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AP000553.2-201ENST00000609038 441 ntBASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
ALMS1Q8TCU4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AL137077.1-201ENST00000442115 528 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC091691.1-201ENST00000583587 1018 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AC002511.3-201ENST00000638098 420 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 BIN3-212ENST00000640731 450 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 OR2A1-AS1-203ENST00000468575 568 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AK2-208ENST00000487289 920 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 NDUFB1-202ENST00000553514 454 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 CYP4F10P-201ENST00000589560 752 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 FMO6P-201ENST00000236166 1620 ntBASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
ALMS1Q8TCU4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms