Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.15□□□□□ -0.3
CLDN20P56880 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CLDN20P56880 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CLDN20P56880 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CLDN20P56880 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CLDN20P56880 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC215219.1-201ENST00000400706 1817 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 AC016700.1-201ENST00000429424 312 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 FNTAP2-201ENST00000430308 634 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN20P56880 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 EIF4HP1-201ENST00000453115 687 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN20P56880 AKR7A2P1-201ENST00000460134 915 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 AC022494.1-201ENST00000466044 728 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 AC006122.1-201ENST00000493323 440 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 HLA-J-204ENST00000495278 958 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN20P56880 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC103810.3-201ENST00000583567 96 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC138649.2-201ENST00000615886 705 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN20P56880 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.14□□□□□ -0.31
CLDN20P56880 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 FAM90A7P-201ENST00000382628 1395 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 FAM90A23P-201ENST00000400136 1395 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 CYP4F23P-201ENST00000593402 1579 ntBASIC13.14□□□□□ -0.31
CLDN20P56880 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.14□□□□□ -0.31
CLDN20P56880 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.14□□□□□ -0.31
CLDN20P56880 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CLDN20P56880 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.14□□□□□ -0.31
CLDN20P56880 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CLDN20P56880 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.13□□□□□ -0.31
CLDN20P56880 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CLDN20P56880 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CLDN20P56880 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms