Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CCR9P51686 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCR9P51686 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.62□□□□□ -0.39
CCR9P51686 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AC011700.1-201ENST00000610409 2627 ntBASIC12.61□□□□□ -0.39
CCR9P51686 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 POM121L14P-201ENST00000406100 1558 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 AC024075.2-201ENST00000598112 1473 ntBASIC12.61□□□□□ -0.39
CCR9P51686 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 AC005229.1-201ENST00000392885 409 ntBASIC12.61□□□□□ -0.39
CCR9P51686 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 AC136604.1-202ENST00000425471 771 ntBASIC12.61□□□□□ -0.39
CCR9P51686 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 INE1-201ENST00000456273 945 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AC106760.1-201ENST00000508690 800 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 TP53TG3HP-202ENST00000569755 579 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 MIR4683-201ENST00000579659 81 ntBASIC12.61□□□□□ -0.39
CCR9P51686 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 RN7SL713P-201ENST00000582127 302 ntBASIC12.61□□□□□ -0.39
CCR9P51686 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CCR9P51686 AC010319.3-201ENST00000597028 470 ntBASIC12.61□□□□□ -0.39
CCR9P51686 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
CCR9P51686 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 AL359845.1-201ENST00000458202 1648 ntBASIC12.61□□□□□ -0.39
CCR9P51686 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 AP000437.1-201ENST00000624057 2085 ntBASIC12.61□□□□□ -0.39
CCR9P51686 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.61□□□□□ -0.39
CCR9P51686 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.61□□□□□ -0.39
CCR9P51686 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CCR9P51686 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 DLX4-206ENST00000611342 1662 ntBASIC12.61□□□□□ -0.39
CCR9P51686 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCR9P51686 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
CCR9P51686 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.6□□□□□ -0.39
CCR9P51686 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CCR9P51686 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms