Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.55□□□□□ -0.24
CLK1P49759 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.55□□□□□ -0.24
CLK1P49759 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 AC063926.2-201ENST00000623766 1308 ntBASIC13.55□□□□□ -0.24
CLK1P49759 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.55□□□□□ -0.24
CLK1P49759 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.55□□□□□ -0.24
CLK1P49759 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLK1P49759 KC6-207ENST00000600644 2311 ntTSL 3 BASIC13.55□□□□□ -0.24
CLK1P49759 OR2I1P-208ENST00000641137 4948 ntBASIC13.54□□□□□ -0.24
CLK1P49759 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.54□□□□□ -0.24
CLK1P49759 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 AC111170.3-201ENST00000624282 2464 ntBASIC13.54□□□□□ -0.24
CLK1P49759 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CLK1P49759 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.54□□□□□ -0.24
CLK1P49759 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CLK1P49759 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 BCRP2-202ENST00000447763 634 ntBASIC13.54□□□□□ -0.24
CLK1P49759 FO681548.1-201ENST00000455617 1132 ntBASIC13.54□□□□□ -0.24
CLK1P49759 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 FTLP10-202ENST00000505798 471 ntBASIC13.54□□□□□ -0.24
CLK1P49759 AC106760.1-201ENST00000508690 800 ntBASIC13.54□□□□□ -0.24
CLK1P49759 BCRP6-201ENST00000510112 632 ntBASIC13.54□□□□□ -0.24
CLK1P49759 BCRP7-201ENST00000511549 544 ntBASIC13.54□□□□□ -0.24
CLK1P49759 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 GNRHR2-203ENST00000581100 1187 ntBASIC13.54□□□□□ -0.24
CLK1P49759 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.54□□□□□ -0.24
CLK1P49759 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
CLK1P49759 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.54□□□□□ -0.24
CLK1P49759 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.54□□□□□ -0.24
CLK1P49759 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CLK1P49759 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.53□□□□□ -0.24
CLK1P49759 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.53□□□□□ -0.24
CLK1P49759 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.53□□□□□ -0.24
CLK1P49759 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
CLK1P49759 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLK1P49759 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.53□□□□□ -0.24
CLK1P49759 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CLK1P49759 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CLK1P49759 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CLK1P49759 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms