Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP6P35125 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 KRT8P42-201ENST00000405771 1399 ntBASIC18.74■□□□□ 0.59
USP6P35125 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 RCC2P5-201ENST00000492126 1487 ntBASIC18.74■□□□□ 0.59
USP6P35125 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
USP6P35125 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
USP6P35125 MPV17-209ENST00000405983 859 ntTSL 5 BASIC18.74■□□□□ 0.59
USP6P35125 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 AC136604.1-202ENST00000425471 771 ntBASIC18.74■□□□□ 0.59
USP6P35125 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 AL136084.1-201ENST00000449172 318 ntBASIC18.74■□□□□ 0.59
USP6P35125 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 HNRNPA3P6-201ENST00000472163 1006 ntBASIC18.74■□□□□ 0.59
USP6P35125 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC18.74■□□□□ 0.59
USP6P35125 AC018846.1-201ENST00000568231 183 ntBASIC18.74■□□□□ 0.59
USP6P35125 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
USP6P35125 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC18.74■□□□□ 0.59
USP6P35125 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
USP6P35125 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 GUCY2EP-203ENST00000531117 1918 ntBASIC18.73■□□□□ 0.59
USP6P35125 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 INTS4P1-203ENST00000641008 3683 ntBASIC18.73■□□□□ 0.59
USP6P35125 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 AC040160.2-201ENST00000623816 1675 ntBASIC18.73■□□□□ 0.59
USP6P35125 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
USP6P35125 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 AC120498.7-201ENST00000562876 330 ntBASIC18.73■□□□□ 0.59
USP6P35125 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC18.73■□□□□ 0.59
USP6P35125 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC18.73■□□□□ 0.59
USP6P35125 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
USP6P35125 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.73■□□□□ 0.59
USP6P35125 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
USP6P35125 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 AF013593.1-201ENST00000458074 1487 ntBASIC18.72■□□□□ 0.59
USP6P35125 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC18.72■□□□□ 0.59
USP6P35125 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
USP6P35125 GOLGA8IP-202ENST00000611635 2100 ntBASIC18.72■□□□□ 0.59
USP6P35125 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 AK2P2-201ENST00000439142 405 ntBASIC18.72■□□□□ 0.59
USP6P35125 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 RPL29P2-202ENST00000498671 657 ntBASIC18.72■□□□□ 0.59
USP6P35125 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC18.72■□□□□ 0.59
USP6P35125 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC18.72■□□□□ 0.59
USP6P35125 SRPK2P-201ENST00000523408 1100 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms