Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC125807.1-201ENST00000483097 614 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AP001582.1-201ENST00000525856 295 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 SRD5A3P1-201ENST00000603021 949 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AL844908.2-201ENST00000609461 460 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 BX088702.1-201ENST00000610784 235 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AL662799.1-202ENST00000614205 422 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AP002761.4-201ENST00000565433 3361 ntBASIC12.04□□□□□ -0.48
KCNIP3Q9Y2W7 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TRIM80P-201ENST00000455685 2848 ntBASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 BAD-202ENST00000394531 631 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 EIF3FP3-201ENST00000434851 1086 ntBASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 FO681548.1-201ENST00000455617 1132 ntBASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 BAD-207ENST00000544785 525 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SPDYE22P-201ENST00000582158 798 ntBASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP3Q9Y2W7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.02□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms