Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 AC104596.2-201ENST00000512793 793 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 TPRX2P-201ENST00000535362 881 ntBASIC11.65□□□□□ -0.54
RAB40CQ96S21 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.65□□□□□ -0.54
RAB40CQ96S21 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
RAB40CQ96S21 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RAB40CQ96S21 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
RAB40CQ96S21 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
RAB40CQ96S21 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AL442647.2-201ENST00000429864 857 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 INGX-202ENST00000489074 768 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 SPDYE18-201ENST00000510091 1050 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 AC002472.3-201ENST00000640124 621 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 TNRC18P1-201ENST00000502875 3650 ntBASIC11.64□□□□□ -0.55
RAB40CQ96S21 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
RAB40CQ96S21 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
RAB40CQ96S21 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 AC020910.5-201ENST00000623668 1865 ntBASIC11.63□□□□□ -0.55
RAB40CQ96S21 AL118506.1-201ENST00000601296 3082 ntBASIC11.63□□□□□ -0.55
RAB40CQ96S21 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 MSNP1-201ENST00000511640 1732 ntBASIC11.63□□□□□ -0.55
RAB40CQ96S21 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
RAB40CQ96S21 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
RAB40CQ96S21 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms