Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 GCSHP3-201ENST00000431120 391 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC093909.3-201ENST00000504783 336 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC003686.1-201ENST00000550956 1034 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AL022334.2-201ENST00000610000 484 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AL451007.2-201ENST00000632004 563 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 CASP16P-204ENST00000635032 809 ntBASIC16.71■□□□□ 0.27
TRIM47Q96LD4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM47Q96LD4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.71■□□□□ 0.26
TRIM47Q96LD4 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.71■□□□□ 0.26
TRIM47Q96LD4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
TRIM47Q96LD4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 RNA5SP417-201ENST00000516459 108 ntBASIC16.7■□□□□ 0.26
TRIM47Q96LD4 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 EIF5AP2-201ENST00000585668 1047 ntBASIC16.7■□□□□ 0.26
TRIM47Q96LD4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM47Q96LD4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 KRT17P5-201ENST00000332088 839 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 GUSBP10-201ENST00000417412 665 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 AQP7P5-201ENST00000428759 1049 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 DDX39AP1-201ENST00000445147 1181 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 AQP7P4-201ENST00000447083 1042 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 AQP7P2-201ENST00000453967 1041 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 FAM86KP-201ENST00000509817 987 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM47Q96LD4 AP000322.3-201ENST00000608665 388 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 AQP7P3-201ENST00000624547 1041 ntBASIC16.69■□□□□ 0.26
TRIM47Q96LD4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms